Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm8194-201ENSMUST00000159783 859 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm44958-201ENSMUST00000203734 736 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Gm21811-201ENSMUST00000096485 930 ntBASIC13.12□□□□□ -0.31
Col4a6B1AVK5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm15432-201ENSMUST00000121106 195 ntBASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm7600-201ENSMUST00000209657 785 ntBASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col4a6B1AVK5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.1□□□□□ -0.31
Col4a6B1AVK5 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.1□□□□□ -0.31
Col4a6B1AVK5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col4a6B1AVK5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms