Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gm45504-201ENSMUST00000211407 2107 ntBASIC10.99□□□□□ -0.65
Col6a4A2AX52 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.99□□□□□ -0.65
Col6a4A2AX52 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Col6a4A2AX52 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm44262-201ENSMUST00000204969 372 ntBASIC10.98□□□□□ -0.65
Col6a4A2AX52 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.98□□□□□ -0.65
Col6a4A2AX52 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a4A2AX52 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 AA914427-201ENSMUST00000193194 1166 ntBASIC10.97□□□□□ -0.65
Col6a4A2AX52 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
Col6a4A2AX52 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms