Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm6963-201ENSMUST00000147879 379 ntBASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Rps4l-202ENSMUST00000204242 789 ntBASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn3aA2ASI5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Gm24845-201ENSMUST00000158034 109 ntBASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn3aA2ASI5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm12058-201ENSMUST00000118614 437 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm9083-201ENSMUST00000120423 819 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm27023-201ENSMUST00000182372 285 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm27341-201ENSMUST00000183570 106 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn3aA2ASI5 Gm12314-201ENSMUST00000118104 538 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms