Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
H2afb2S4R1M3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.04□□□□□ -0.32
H2afb2S4R1M3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.04□□□□□ -0.32
H2afb2S4R1M3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
H2afb2S4R1M3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb2S4R1M3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
H2afb2S4R1M3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.02□□□□□ -0.33
H2afb2S4R1M3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms