Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Cldn6Q9Z262 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.21□□□□□ -0.45
Cldn6Q9Z262 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gm8598-201ENSMUST00000221184 836 ntBASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.21□□□□□ -0.45
Cldn6Q9Z262 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cldn6Q9Z262 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cldn6Q9Z262 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms