Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm24447-201ENSMUST00000083977 338 ntBASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cx3cr1Q9Z0D9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm38144-201ENSMUST00000192790 465 ntBASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cx3cr1Q9Z0D9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cx3cr1Q9Z0D9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cx3cr1Q9Z0D9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms