Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gm5566-201ENSMUST00000116118 459 ntBASIC10.16□□□□□ -0.78
CcsQ9WU84 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gm27306-201ENSMUST00000183970 107 ntBASIC10.16□□□□□ -0.78
CcsQ9WU84 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.16□□□□□ -0.78
CcsQ9WU84 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
CcsQ9WU84 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CcsQ9WU84 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm14767-201ENSMUST00000121559 586 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm27680-201ENSMUST00000184192 160 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm37230-201ENSMUST00000194491 818 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CcsQ9WU84 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.15□□□□□ -0.78
CcsQ9WU84 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.15□□□□□ -0.78
CcsQ9WU84 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.15□□□□□ -0.79
CcsQ9WU84 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CcsQ9WU84 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
CcsQ9WU84 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CcsQ9WU84 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.14□□□□□ -0.79
CcsQ9WU84 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CcsQ9WU84 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms