Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Gm25261-201ENSMUST00000157416 134 ntBASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Phtf1Q9QZ09 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Gm37424-201ENSMUST00000191727 561 ntBASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Phtf1Q9QZ09 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Snora78-201ENSMUST00000158630 128 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm17208-201ENSMUST00000168388 535 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm22121-201ENSMUST00000175148 54 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm6222-202ENSMUST00000182143 629 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm19163-201ENSMUST00000223313 780 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.3□□□□□ -0.12
Phtf1Q9QZ09 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm5187-201ENSMUST00000117317 991 ntBASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Gm26185-201ENSMUST00000157692 266 ntBASIC14.29□□□□□ -0.12
Phtf1Q9QZ09 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms