Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmgn3Q9DCB1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm35960-201ENSMUST00000202712 767 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmgn3Q9DCB1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Gm6912-201ENSMUST00000117218 544 ntBASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Mir1895-201ENSMUST00000122615 79 ntBASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 597.9 ms