Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Mir1938-201ENSMUST00000158746 100 ntBASIC17.13■□□□□ 0.33
U2af1Q9D883 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Gm38002-201ENSMUST00000193255 180 ntBASIC17.13■□□□□ 0.33
U2af1Q9D883 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.13■□□□□ 0.33
U2af1Q9D883 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
U2af1Q9D883 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.12■□□□□ 0.33
U2af1Q9D883 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.12■□□□□ 0.33
U2af1Q9D883 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.12■□□□□ 0.33
U2af1Q9D883 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.12■□□□□ 0.33
U2af1Q9D883 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.12■□□□□ 0.33
U2af1Q9D883 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.12■□□□□ 0.33
U2af1Q9D883 Gm32025-201ENSMUST00000217960 307 ntBASIC17.12■□□□□ 0.33
U2af1Q9D883 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.12■□□□□ 0.33
U2af1Q9D883 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
U2af1Q9D883 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
U2af1Q9D883 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC17.12■□□□□ 0.33
U2af1Q9D883 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
U2af1Q9D883 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
U2af1Q9D883 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.11■□□□□ 0.33
U2af1Q9D883 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Snord83b-201ENSMUST00000104546 94 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm14704-201ENSMUST00000120300 874 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm7809-201ENSMUST00000153199 742 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.11■□□□□ 0.33
U2af1Q9D883 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
U2af1Q9D883 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
U2af1Q9D883 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.11■□□□□ 0.33
U2af1Q9D883 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
U2af1Q9D883 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms