Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp5Q9D7S9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Pck2-205ENSMUST00000226352 2784 ntBASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Gm21854-201ENSMUST00000179901 471 ntBASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp5Q9D7S9 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm37472-201ENSMUST00000192342 4052 ntBASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm11524-201ENSMUST00000119349 807 ntBASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm43575-201ENSMUST00000196420 516 ntBASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp5Q9D7S9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Gm5279-201ENSMUST00000199575 745 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Gm37269-201ENSMUST00000193906 1891 ntBASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp5Q9D7S9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms