Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3a3Q9D554 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Mir874-201ENSMUST00000104769 76 ntBASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm2651-201ENSMUST00000203560 838 ntBASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sf3a3Q9D554 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Gm17971-201ENSMUST00000190239 806 ntBASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms