Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ccdc7Q9D541 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.23■□□□□ 0.03
Ccdc7Q9D541 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Gm15823-201ENSMUST00000064305 670 ntBASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc7Q9D541 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.22■□□□□ 0.03
Ccdc7Q9D541 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc7Q9D541 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm37269-201ENSMUST00000193906 1891 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm12928-201ENSMUST00000117115 573 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm6458-201ENSMUST00000211573 635 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm8598-201ENSMUST00000221184 836 ntBASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc7Q9D541 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc7Q9D541 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc7Q9D541 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc7Q9D541 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms