Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chaf1bQ9D0N7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Mir449b-201ENSMUST00000104833 80 ntBASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm14822-201ENSMUST00000122247 291 ntBASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.24□□□□□ -0.45
Chaf1bQ9D0N7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Chaf1bQ9D0N7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms