Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm15198-201ENSMUST00000117283 177 ntBASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm6023-201ENSMUST00000118217 606 ntBASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Gm43179-201ENSMUST00000198797 275 ntBASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Olfr582-201ENSMUST00000098212 960 ntBASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lsm7Q9CQQ8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Gm18584-201ENSMUST00000203098 964 ntBASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm7Q9CQQ8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.15□□□□□ -0.31
Lsm7Q9CQQ8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm7Q9CQQ8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm11591-201ENSMUST00000120063 702 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm38266-201ENSMUST00000194931 421 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Gm43118-201ENSMUST00000199149 775 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm7Q9CQQ8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lsm7Q9CQQ8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms