Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim8Q99PJ2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.81□□□□□ -0.36
Trim8Q99PJ2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm7063-201ENSMUST00000186840 981 ntBASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.8□□□□□ -0.36
Trim8Q99PJ2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Gm27772-201ENSMUST00000184900 187 ntBASIC12.79□□□□□ -0.36
Trim8Q99PJ2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim8Q99PJ2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms