Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm17794-201ENSMUST00000220252 955 ntBASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubqln4Q99NB8 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Gm9794-201ENSMUST00000202370 423 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubqln4Q99NB8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms