Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gm38223-201ENSMUST00000194484 695 ntBASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdk5rap3Q99LM2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.52□□□□□ -0.24
Cdk5rap3Q99LM2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Gm44872-201ENSMUST00000207864 420 ntBASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Syt7-204ENSMUST00000223586 1344 ntBASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cdk5rap3Q99LM2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Gm7730-201ENSMUST00000212486 454 ntBASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap3Q99LM2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms