Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm12291-201ENSMUST00000121627 311 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm37201-201ENSMUST00000191845 523 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Gm44651-201ENSMUST00000207343 372 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.71□□□□□ -0.21
Clp1Q99LI9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Clp1Q99LI9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clp1Q99LI9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.7□□□□□ -0.22
Clp1Q99LI9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm8913-201ENSMUST00000209491 641 ntBASIC13.7□□□□□ -0.22
Clp1Q99LI9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.7□□□□□ -0.22
Clp1Q99LI9 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.7□□□□□ -0.22
Clp1Q99LI9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.7□□□□□ -0.22
Clp1Q99LI9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clp1Q99LI9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm14921-201ENSMUST00000118643 908 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.69□□□□□ -0.22
Clp1Q99LI9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clp1Q99LI9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms