Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vmp1Q99KU0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.63□□□□□ -0.39
Vmp1Q99KU0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vmp1Q99KU0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vmp1Q99KU0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.62□□□□□ -0.39
Vmp1Q99KU0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vmp1Q99KU0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Gm45384-201ENSMUST00000210451 277 ntBASIC12.61□□□□□ -0.39
Vmp1Q99KU0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vmp1Q99KU0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vmp1Q99KU0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms