Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gm28911-201ENSMUST00000188837 117 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb13Q91Y06 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm16202-201ENSMUST00000117532 544 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm44069-201ENSMUST00000204898 506 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm8463-201ENSMUST00000208573 613 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb13Q91Y06 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Gm12091-201ENSMUST00000146791 830 ntBASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb13Q91Y06 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb13Q91Y06 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms