Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdhb6Q91XZ4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Pcdhb6Q91XZ4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb6Q91XZ4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb6Q91XZ4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhb6Q91XZ4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
Pcdhb6Q91XZ4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm12291-201ENSMUST00000121627 311 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhb6Q91XZ4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm12203-201ENSMUST00000118235 598 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm12209-201ENSMUST00000120089 596 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb6Q91XZ4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms