Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Mir874-201ENSMUST00000104769 76 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Gm15371-201ENSMUST00000117057 784 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Gm18624-201ENSMUST00000220966 658 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Gm15823-201ENSMUST00000064305 670 ntBASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhga3Q91XY5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhga3Q91XY5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pcdhga3Q91XY5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga3Q91XY5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pcdhga3Q91XY5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga3Q91XY5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pcdhga3Q91XY5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms