Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Gm8227-201ENSMUST00000223306 571 ntBASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgc5Q91XW9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm13786-201ENSMUST00000122371 333 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Mir433-201ENSMUST00000093564 124 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Paupar-201ENSMUST00000194826 3482 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhgc5Q91XW9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Gm17330-201ENSMUST00000221047 165 ntBASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhgc5Q91XW9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgc5Q91XW9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhgc5Q91XW9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms