Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Mir449b-201ENSMUST00000104833 80 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm8000-201ENSMUST00000188378 592 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup35Q8R4R6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.63□□□□□ -0.71
Nup35Q8R4R6 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Nup35Q8R4R6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm44344-201ENSMUST00000200287 129 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Gm17795-201ENSMUST00000214505 757 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup35Q8R4R6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms