Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Atf7Q8R0S1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm15806-201ENSMUST00000120696 955 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gm8810-201ENSMUST00000172895 754 ntBASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Atf7Q8R0S1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gm24196-201ENSMUST00000179161 110 ntBASIC15.37■□□□□ 0.05
Atf7Q8R0S1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gm37922-201ENSMUST00000195596 455 ntBASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Atf7Q8R0S1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms