Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Gm4271-201ENSMUST00000174444 973 ntBASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Gm16177-201ENSMUST00000120728 718 ntBASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Gm6458-201ENSMUST00000211573 635 ntBASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sf3a1Q8K4Z5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sf3a1Q8K4Z5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gm15824-201ENSMUST00000119516 955 ntBASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Gm10146-201ENSMUST00000072739 309 ntBASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sf3a1Q8K4Z5 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms