Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm44069-201ENSMUST00000204898 506 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm17794-201ENSMUST00000220252 955 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.31□□□□□ -0.44
Clrn1Q8K445 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.31□□□□□ -0.44
Clrn1Q8K445 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Clrn1Q8K445 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Gm6458-201ENSMUST00000211573 635 ntBASIC12.3□□□□□ -0.44
Clrn1Q8K445 Gm8598-201ENSMUST00000221184 836 ntBASIC12.3□□□□□ -0.44
Clrn1Q8K445 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.3□□□□□ -0.44
Clrn1Q8K445 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.3□□□□□ -0.44
Clrn1Q8K445 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Clrn1Q8K445 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Clrn1Q8K445 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clrn1Q8K445 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms