Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc28bQ8CEG5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm6415-201ENSMUST00000118488 348 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm25948-201ENSMUST00000175334 112 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc28bQ8CEG5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc28bQ8CEG5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.9□□□□□ -0.35
Ccdc28bQ8CEG5 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc28bQ8CEG5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm18905-201ENSMUST00000205454 928 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm5779-201ENSMUST00000218467 910 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc28bQ8CEG5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccdc28bQ8CEG5 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms