Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Mir7085-201ENSMUST00000184353 66 ntBASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vcpip1Q8CDG3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Mir1938-201ENSMUST00000158746 100 ntBASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vcpip1Q8CDG3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vcpip1Q8CDG3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm15824-201ENSMUST00000119516 955 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm19931-201ENSMUST00000198920 368 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm9899-201ENSMUST00000065519 555 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.02□□□□□ -0.17
Vcpip1Q8CDG3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcpip1Q8CDG3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vcpip1Q8CDG3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vcpip1Q8CDG3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vcpip1Q8CDG3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms