Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.41□□□□□ -0.42
Eri3Q8C460 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Eri3Q8C460 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.41□□□□□ -0.42
Eri3Q8C460 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Eri3Q8C460 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Eri3Q8C460 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Gm37922-201ENSMUST00000195596 455 ntBASIC12.4□□□□□ -0.42
Eri3Q8C460 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Eri3Q8C460 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.4□□□□□ -0.42
Eri3Q8C460 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Eri3Q8C460 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Eri3Q8C460 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Eri3Q8C460 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Eri3Q8C460 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Eri3Q8C460 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Eri3Q8C460 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.4□□□□□ -0.43
Eri3Q8C460 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm12203-201ENSMUST00000118235 598 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm12209-201ENSMUST00000120089 596 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm27847-201ENSMUST00000183711 107 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm27375-201ENSMUST00000183799 107 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.39□□□□□ -0.43
Eri3Q8C460 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.39□□□□□ -0.43
Eri3Q8C460 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.39□□□□□ -0.43
Eri3Q8C460 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Eri3Q8C460 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms