Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm15276-201ENSMUST00000145953 498 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm38317-201ENSMUST00000195564 343 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 AC132260.2-201ENSMUST00000224482 344 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.06■□□□□ 0.16
Ptcd1Q8C2E4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm7857-201ENSMUST00000117957 358 ntBASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm12502-201ENSMUST00000120197 444 ntBASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ptcd1Q8C2E4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Gm13570-201ENSMUST00000140763 309 ntBASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Gm8959-201ENSMUST00000213150 571 ntBASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ptcd1Q8C2E4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms