Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Pck2-205ENSMUST00000226352 2784 ntBASIC13.6□□□□□ -0.23
Sh3rf3Q8C120 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm38671-201ENSMUST00000200573 130 ntBASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm7287-201ENSMUST00000205267 602 ntBASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm7653-201ENSMUST00000214567 508 ntBASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh3rf3Q8C120 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh3rf3Q8C120 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm13612-201ENSMUST00000119276 390 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm11978-201ENSMUST00000122315 466 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Proscos-202ENSMUST00000178990 666 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh3rf3Q8C120 Gm44069-201ENSMUST00000204898 506 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms