Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim35Q8C006 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim35Q8C006 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim35Q8C006 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim35Q8C006 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim35Q8C006 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm2810-201ENSMUST00000118681 990 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm11945-201ENSMUST00000120551 476 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm11543-201ENSMUST00000120758 370 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim35Q8C006 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm21756-201ENSMUST00000178380 930 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Olfr1055-202ENSMUST00000188023 939 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm18268-201ENSMUST00000208445 943 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trim35Q8C006 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 AC164597.1-201ENSMUST00000226538 514 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 AC080021.1-201ENSMUST00000228104 700 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Vmn1r199-201ENSMUST00000091732 1104 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.35□□□□□ -0.11
Trim35Q8C006 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim35Q8C006 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim35Q8C006 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm42755-201ENSMUST00000198533 1493 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm23429-201ENSMUST00000122486 149 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim35Q8C006 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.34□□□□□ -0.11
Trim35Q8C006 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms