Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scfd1Q8BRF7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Daam2-202ENSMUST00000224595 1926 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm20482-202ENSMUST00000174729 825 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scfd1Q8BRF7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Mir339-201ENSMUST00000083659 96 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scfd1Q8BRF7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.84□□□□□ -0.03
Scfd1Q8BRF7 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms