Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Gm15770-201ENSMUST00000117498 584 ntBASIC10.74□□□□□ -0.69
Smco3Q8BQM7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smco3Q8BQM7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm11745-201ENSMUST00000121669 448 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm9824-201ENSMUST00000178707 561 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm8927-201ENSMUST00000181978 981 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm33320-201ENSMUST00000192232 530 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm3222-201ENSMUST00000071282 990 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco3Q8BQM7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm15678-201ENSMUST00000117573 960 ntBASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm1401-201ENSMUST00000122048 772 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms