Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm29667-201ENSMUST00000190817 490 ntBASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm9797-201ENSMUST00000052902 613 ntBASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.4□□□□□ -0.59
Cdhr3Q8BL00 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Gm15487-201ENSMUST00000122373 465 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Gm27989-201ENSMUST00000184721 107 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Gm42550-201ENSMUST00000201553 960 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Gm26315-201ENSMUST00000083890 321 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdhr3Q8BL00 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdhr3Q8BL00 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms