Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Smg1Q8BKX6 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm38092-201ENSMUST00000195600 653 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm5733-201ENSMUST00000190232 939 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm42518-201ENSMUST00000196277 938 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm18038-201ENSMUST00000197900 485 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gm40879-201ENSMUST00000220759 612 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Gzmn-202ENSMUST00000225535 989 ntBASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.74□□□□□ -0.69
Smg1Q8BKX6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm18204-201ENSMUST00000209835 793 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm5904-201ENSMUST00000210286 865 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm3283-201ENSMUST00000199319 1350 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm45120-201ENSMUST00000208880 408 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.73□□□□□ -0.69
Smg1Q8BKX6 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms