Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm8213-201ENSMUST00000118191 441 ntBASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm13829-201ENSMUST00000119600 138 ntBASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm6091-201ENSMUST00000098307 165 ntBASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srrm4Q8BKA3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm4984-201ENSMUST00000115987 360 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm14350-201ENSMUST00000116642 640 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm12390-201ENSMUST00000117897 397 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm6266-201ENSMUST00000203844 806 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srrm4Q8BKA3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm8810-201ENSMUST00000172895 754 ntBASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm29649-201ENSMUST00000185649 419 ntBASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.31□□□□□ -0.6
Srrm4Q8BKA3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms