Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Mir3113-201ENSMUST00000175478 76 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm17330-201ENSMUST00000221047 165 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Slc5a7Q8BGY9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm12403-201ENSMUST00000121384 959 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Slc5a7Q8BGY9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
Slc5a7Q8BGY9 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms