Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atg4dQ8BGV9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atg4dQ8BGV9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Atg4dQ8BGV9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atg4dQ8BGV9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atg4dQ8BGV9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atg4dQ8BGV9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms