Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm8463-201ENSMUST00000208573 613 ntBASIC12.8□□□□□ -0.36
Ccdc116Q80X53 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccdc116Q80X53 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccdc116Q80X53 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm14716-201ENSMUST00000120138 718 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm6152-201ENSMUST00000151704 340 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm19087-201ENSMUST00000191430 946 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm44069-201ENSMUST00000204898 506 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc116Q80X53 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms