Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.11□□□□□ -0.47
Pif1Q80SX8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pif1Q80SX8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm15808-201ENSMUST00000119046 604 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm27320-201ENSMUST00000184892 109 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm37489-201ENSMUST00000191883 159 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.1□□□□□ -0.47
Pif1Q80SX8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pif1Q80SX8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm11591-201ENSMUST00000120063 702 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm16479-201ENSMUST00000121706 932 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm26185-201ENSMUST00000157692 266 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.09□□□□□ -0.47
Pif1Q80SX8 Gm18827-201ENSMUST00000188341 790 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms