Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Matn2-203ENSMUST00000226766 3252 ntBASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Gm16215-201ENSMUST00000161990 637 ntBASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Mir7221-201ENSMUST00000184009 72 ntBASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ctdp1Q7TSG2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ctdp1Q7TSG2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Ctdp1Q7TSG2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms