Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm23363-201ENSMUST00000175024 79 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm44651-201ENSMUST00000207343 372 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm23200-201ENSMUST00000104379 132 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm13996-201ENSMUST00000118456 430 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm45925-201ENSMUST00000218882 744 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Snrnp40Q6PE01 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Snrnp40Q6PE01 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms