Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Smarcd3Q6P9Z1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm10576-201ENSMUST00000191927 825 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.98□□□□□ -0.49
Smarcd3Q6P9Z1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Mir7023-201ENSMUST00000185093 64 ntBASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gm5279-201ENSMUST00000199575 745 ntBASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smarcd3Q6P9Z1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms