Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgb4Q6P8W9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm19309-201ENSMUST00000218295 205 ntBASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.68□□□□□ -0.22
Hmgb4Q6P8W9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm45930-201ENSMUST00000221330 292 ntBASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgb4Q6P8W9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgb4Q6P8W9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms