Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.43□□□□□ -0.1
Krt39Q6IFX4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Gm2423-201ENSMUST00000074863 733 ntBASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Gm26315-201ENSMUST00000083890 321 ntBASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.42□□□□□ -0.1
Krt39Q6IFX4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt39Q6IFX4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Krt39Q6IFX4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms