Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.11■□□□□ 0.33
Gli3Q61602 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gli3Q61602 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gli3Q61602 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Gli3Q61602 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gli3Q61602 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gli3Q61602 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Gm5555-201ENSMUST00000120352 1111 ntBASIC17.1■□□□□ 0.33
Gli3Q61602 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Gli3Q61602 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC17.1■□□□□ 0.33
Gli3Q61602 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC17.1■□□□□ 0.33
Gli3Q61602 Gm29763-201ENSMUST00000205306 616 ntBASIC17.1■□□□□ 0.33
Gli3Q61602 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Gli3Q61602 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gli3Q61602 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Gli3Q61602 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm6903-201ENSMUST00000160509 1366 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Gli3Q61602 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm22920-201ENSMUST00000102175 109 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm12453-201ENSMUST00000121981 331 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC17.09■□□□□ 0.33
Gli3Q61602 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm43912-201ENSMUST00000204352 538 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC17.09■□□□□ 0.33
Gli3Q61602 Gm44647-201ENSMUST00000207402 428 ntBASIC17.09■□□□□ 0.33
Gli3Q61602 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gli3Q61602 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gli3Q61602 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gli3Q61602 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Gli3Q61602 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli3Q61602 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.08■□□□□ 0.33
Gli3Q61602 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli3Q61602 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli3Q61602 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gli3Q61602 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gli3Q61602 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gli3Q61602 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC17.08■□□□□ 0.32
Gli3Q61602 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Trav11n-201ENSMUST00000200113 343 ntBASIC17.08■□□□□ 0.32
Gli3Q61602 Gm45575-201ENSMUST00000210283 548 ntBASIC17.08■□□□□ 0.32
Gli3Q61602 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC17.08■□□□□ 0.32
Gli3Q61602 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gli3Q61602 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gli3Q61602 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gli3Q61602 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms