Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm25261-201ENSMUST00000157416 134 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm6222-202ENSMUST00000182143 629 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm38002-201ENSMUST00000193255 180 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm8099-201ENSMUST00000200510 742 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm45880-201ENSMUST00000213041 853 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.58□□□□□ -0.24
Smarcd1Q61466 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd1Q61466 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 Gm18054-201ENSMUST00000207539 555 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Gm32025-201ENSMUST00000217960 307 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.57□□□□□ -0.24
Smarcd1Q61466 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd1Q61466 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Snord83b-201ENSMUST00000104546 94 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms